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OctoPi - LED matrix control for computational phase contrast
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1
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349
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June 19, 2026
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Setting up the software on a windows computer
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0
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2113
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May 27, 2024
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Cephla HCS Viewer
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1
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915
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August 1, 2025
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Ndviewer Downsampled Acquisition Image Navigator
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0
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744
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July 7, 2025
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Squid LED/Laser power linearization
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0
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854
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May 8, 2025
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Setting up image stitcher on a Windows computer
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0
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963
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March 7, 2025
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Setting up desktop shortcut on a Windows computer
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0
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1042
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April 3, 2025
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Generating a "done" file when an acquisition has completed
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2
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1072
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August 14, 2024
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Multi-point acquisition feature error (well-selection)
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2
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1144
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July 31, 2024
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SQUID upgrade with automatic filter wheel
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0
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1199
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July 4, 2024
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Enabling new LED illumination channels
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7
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1371
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July 4, 2024
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Running the software on Windows
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6
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2014
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June 7, 2024
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Using SCI Microscopy LED array/dome on Squid
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0
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1148
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April 10, 2024
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ASHLAR image-stitching helper class
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2
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1513
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December 29, 2023
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Focus map generation for contrast-based AF
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0
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1313
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December 27, 2023
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Setting up software with Raspberry Pi5
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0
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1548
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December 11, 2023
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Compatibility notes and config file migration for the new build (2023-11-20) of Squid (octopi-research)
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0
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1169
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November 21, 2023
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Setting up a new computer with Ubuntu
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3
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3807
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March 13, 2024
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Incorporating the per-FOV image processing thread into custom multipoint scripts
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0
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1153
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October 16, 2023
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Updating PID control for XY stage (with code examples)
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0
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1448
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October 11, 2023
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Synchronizing camera acquisition with laser sweeping
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0
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982
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September 21, 2023
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Epifluorescence optical train assembly diagram
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0
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1771
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September 22, 2022
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Assembly guide for inverted system with the 60 mm x 60 mm stage
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0
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1692
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January 22, 2023
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Reflection-based autofocus user guide
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0
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1812
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November 15, 2022
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Setting up the HCS software
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0
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1557
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September 13, 2022
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Setting up Arduino/Teensyduino IDE for uploading firmware
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0
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3076
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September 12, 2022
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