Software


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Setting up a new computer with Ubuntu

The following have been tested on MSI Katana GF66 with i5-11400H/RTX3050 and i5-12400H/RTX3050, and MSI Aegis i7-11700K/RTX3070 Step 1: Download the image for Ubuntu 20.04.6 (ubuntu-20.04.6-desktop-amd64.iso) and create…

3 1321 March 13, 2024
About the Software category
0 268 August 18, 2022
Setting up the software on a windows computer
0 228 May 27, 2024
Generating a "done" file when an acquisition has completed
2 133 August 14, 2024
Multi-point acquisition feature error (well-selection)
2 142 July 31, 2024
Enabling new LED illumination channels
7 212 July 4, 2024
Running the software on Windows
6 449 June 7, 2024
Using SCI Microscopy LED array/dome on Squid
0 252 April 10, 2024
ASHLAR image-stitching helper class
2 303 December 29, 2023
Focus map generation for contrast-based AF
0 313 December 27, 2023
Setting up software with Raspberry Pi5
0 520 December 11, 2023
Compatibility notes and config file migration for the new build (2023-11-20) of Squid (octopi-research)
0 288 November 21, 2023
Incorporating the per-FOV image processing thread into custom multipoint scripts
0 318 October 16, 2023
Synchronizing camera acquisition with laser sweeping
0 280 September 21, 2023
Reflection-based autofocus user guide
0 571 November 15, 2022
Setting up the HCS software
0 530 September 13, 2022
Setting up Arduino/Teensyduino IDE for uploading firmware
0 728 September 12, 2022